This had proven to be the hardest thing to find, I have found one, cumbersome but works very well, I will change it into a plugin once I get the time to do this.
HOW EVER
It is not quite correct. I noticed, it doesnt list it in a tree structure and orders them according [...]

“Comments are closed”, No Comments must be removed from the theme

http://wordpress.org/support/topic/31364
Need to change comments.php in the theme folder
Add sitemap file in the theme folder:

http://wordpress.org/support/topic/35600
http://www.dagondesign.com/articles/sitemap-generator-for-wordpress/

Remove Sub category posts from categories page
goto this post (remove Sub category post for more info
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Sitemap for wordpress:
http://www.dagondesign.com/articles/sitemap-generator-for-wordpress/
coppermine photo gallery
http://www.sirjohn.co.uk/gallery/displayimage.php?pos=-1454
random page plugin:
http://www.skippy.net/blog/2004/05/27/random-posts/
http://dev.wp-plugins.org/wiki/GetRandomPage
preview theme plugin:
http://boren.nu/archives/2005/03/08/preview-theme-plugin/

Viewlevel2 needs to be able to filter the category listings and, the current archive system that i use. It shows it but when you click on it it doesnt display it. I need the viewlevel things to completely disappear from the sites,
May have to look at the plugins themselves and change them.
The viewlevel [...]

I need subcategory posts from not showing when viewing categories, so far I have not found a plugin that fixes this problem for me.
I did find a trick that can be done at the theme files.
Create a category.php file for the theme in use and possibly copy the code in index.php
Anyway just inside the loop, [...]

Some Posts should not be xhtml validated, So instead of turning it off then turning it on, When saving a post,page, A option should be available to let you choose if the page should be validated, When this option is set, the page should not be validated and saved just as it was typed in.
I [...]